Microbiology & Immunology Theses and Dissertations

 

This collection contains theses and dissertations from the Department of Microbiology & Immunology, collected from the Scholarship@Western Electronic Thesis and Dissertation Repository

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Theses/Dissertations from 2024

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Investigating the effects of physical maturation and sexual debut on HIV-1 susceptibility in adolescent males in Rakai, Uganda, Omar Almomani

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Characterizing and Applying a Nasal Organotypic Model to Investigate the Effects of Immune Profile Types on SARS-CoV-2 Susceptibility, Victor H.K. Lam

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Role of monocyte-derived macrophages in critically ill patients, Yasamin Minazadeh

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Functional and evolutionary dynamics of HIV-1 Nef: Contributions to viral virulence and immune evasion, Mitchell J. Mumby

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Effect of sodium thiosulfate pre-treatment on renal ischemia-reperfusion injury, Pierce BR Nelson

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The Development and Assessment of Immune Responses in Plasmid DNA, VSV-Vectored, and Virus-Like Particle HIV Vaccinations in Murine Models, Lei Qi

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Role of Ikzf3 as a Driver Mutation in B Cell Acute Lymphoblastic Leukemia, Heidi Rysan

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Assessing Helicobacter pylori's HcpE and DsbK's Effects on Immunostimulation in Host Gastric Cells, Noor Salloum

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Contribution of Streptolysin O and Streptolysin S to Streptococcus pyogenes Infections in HLA-Transgenic Mice, Blake A. Shannon

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Exploring New Methods to Dissect Site-Specific Differences in the N-glycosylation Patterns of HIV-1 Envelope Protein Gp120 in Chronic and Transmitted/Founder Virions, Stephen Temesy

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Regulation of ZAP-70 post-translational modifications by HIV-1 accessory proteins Nef and Vpu, Jack E. Teplitsky

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Role of ETV5 Mutations in B Cell Acute Lymphoblastic Leukemia, Joshua S. Yi

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Comparative Analysis of HIV-1 and SARS-CoV-2 Transmission Dynamics: Investigating Viral Fitness, Environmental Factors, and Pathogen-Host Interactions, Yiying Zhang

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Investigating the role of two-component regulatory systems in regulating FnBP-A of Staphylococcus aureus, Yunqi Zhang

Theses/Dissertations from 2023

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The Effect of Kidney Preservation at 10°C with Hemopure and Hydrogen Sulfide Donor, Sodium Thiosulfate, in a Syngeneic Model of Rat Renal Transplantation, Maria Abou Taka

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Mechanisms of lactic acid bacteria secretions as anti-Helicobacter pylori agents, Daelyn Carroll

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Investigating the clinical and microbial factors contributing to calcium-containing kidney stone disease, John A. Chmiel

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Elucidating the Biomechanics of MERTK-Mediated Efferocytosis, Brandon Hayato Dickson

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SARS-CoV-2 infectivity potential in municipal wastewater: Implications for public health & water treatment, Justin Donovan

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Development of a high-throughput approach for testing optimal fecal microbiota transplant material, Shaeley Jae Gibbons

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The Role of Mucosa-Associated Invariant T Cells in an Autochthonous Mouse Model of Bladder Cancer, Inbar A. Habaz

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Evaluating the role of GraS and FadXDEBA in promoting Staphylococcus aureus adaptation to host-derived fatty acids encountered at sites of colonization and infection, Robert C. Kuiack

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The Effects of Cell Envelope Localization of FnBP-A on Staphylococcus aureus FnBP-A Dependent Phenotypes, Camille LeBlanc

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The Role of the MEK1/2-ERK-RSK Signalling Axis in Innate Immune Memory, Rachel Low

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Identification of a PU.1-regulated repressive region in Aicda gene locus, Allanna MacKenzie

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Evolution of overlapping reading frames in virus genomes, Laura Muñoz Baena

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Molecular Characterization of the Antiviral Properties of the Small HERC Family of Proteins, Ermela Paparisto

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Effect of pharmacological inhibition of endogenous hydrogen sulfide production on bladder cancer progression, Sydney Relouw

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Exploration of the Immune Landscape of EBV-associated Gastric Cancers, Mikhail Salnikov

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Novel Roles of PACS-1 Within the Nucleus and the Regulated Secretory Pathway, Steven Trothen

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Characterization of T-Cell Responses to Homocitrulline in a Mouse Model of Rheumatoid Arthritis, Sofya Ulanova

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Inflammation in the Neovaginal Microenvironment of Transfeminine Individuals, Hannah M.J. Wilcox

Theses/Dissertations from 2022

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Investigation of the Binding and Outside-In Signalling Mechanisms of Anti-CD11d Acute Neurotrauma Therapy, Eoin N. Blythe

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TetR family regulator FarR variation controls antimicrobial fatty acid efflux in Staphylococcus aureus, Camryn M. Bonn

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The Role of Coagulase-Negative Staphylococcal Secreted Products on Staphylococcus aureus and Staphylococcus lugdunensis Infections, Denny Chin

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Characterizing the Function of B Cells that Accumulate in the Inflamed Central Nervous System in Anti-Myelin Autoimmunity, Lika Chowdhury

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The Streptococcus pyogenes hyaluronic acid capsule prevents neutrophil clearance, and greater insights into the streptococcal M protein as a vaccine candidate and driver of heart dysfunction, Jacklyn Hurst

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In Vitro and In Vivo Characterization of the Metallodrug BOLD-100 as an Inhibitor of SARS-CoV-2 Replication, Daniel S. Labach

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Regulation of MHC II Trafficking and Expression by Host and Viral Factors, Alex Lac

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Design and Synthesis of Nef:SFK Interaction Inhibitors for Application in an Immune-directed HIV-1 Cure, Antony Lurie

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Immunophenotyping and Functional Assessment of Antiviral CD8+ T Cells in a CLP Mouse Model of Immunosuppression, Alex R. Michaud

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Herbicide Mediated Selection of Sulfonamide Resistant E. coli, Laura P. Muntz

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Campylobacter jejuni Capsular Heptose: Moderation of Host Macrophages and Substrate Channeling During Synthesis, Matthew Myles

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The role of reactive oxygen species in the accumulation of driver mutations in B cell acute lymphoblastic leukemia, Mia P. Sams

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The Effect of Oral and Topical Antibiotics on Foreskin Inflammation and HIV Target Cells in Ugandan Men., Zhongtian (Eric) Shao

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Screening for purine transporters in S. aureus, Tothong Sonpaveerawong

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The Expanding Roles of PACS-1 and PACS-2 in Cellular Physiology: Beyond Vesicular Protein Trafficking, Rong Xuan Zang

Theses/Dissertations from 2021

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Mucosa-Associated Invariant T Cells Undergo Phenotypic Changes Following Fecal Microbiota Transplantation, Jenna M. Benoit

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Microbial innovations for disease management in honey bees, Brendan A. Daisley

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Investigating the in vivo mechanism behind fibronectin binding protein-mediated hypervirulence of Staphylococcus aureus, Jaclyn A. Diamond

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21°C is the emerging ideal temperature for kidney preservation in the presence of hydrogen sulfide, Smriti Juriasingani

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Fishing for the right probiotic: Investigating the mechanism of mucosal-bacterial interactions at the interface of health and productivity in salmonid aquaculture, Luana Langlois

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Testing a Novel Peptide-Infused Cream for Treatment of Rheumatoid Arthritis in DR4tg Mice, Alisha J. Moynahan

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HIV-1 Drug Resistance to Integrase Strand Transfer Inhibitors in HIV-1 non-B Subtypes, Emmanuel Ndashimye

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Metabolic Reprogramming By DNA Tumour Viruses, Martin Prusinkiewicz

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Metabolic origins of urogenital malodour in women and their relationship with their microbiota: can probiotics help?, Scarlett Puebla Barragan

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The E26 Transformation-Specific-Family Transcription Factor Spi-C is Dynamically Regulated by External Signals in B Cells, Hannah L. Raczkowski

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Generation and Characterization of an In Vitro Organotypic Foreskin Model for Future Study of the Penile Microbiome, Geoffrey J. Rempel

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The impacts of psychological stress on innate-like invariant T cell survival, phenotype, and function, Patrick Rudak

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A Workflow to Analyze ETHcD Mass Spectrometry Data for Studying HIV gp120 Glycosylation, Yingxue Sun

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Meningeal B cells in central nervous system autoimmunity: Their phenotype and susceptibility to therapeutic depletion, Yodit Tesfagiorgis

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Characterization and Discovery of Short Linear Motifs Mediating Protein Nuclear Import, Tanner M. Tessier

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The Ability of Lactobacillus spp. to Limit Extracellular ATP Release by Urogenital Bacteria, Hannah Wilcox

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Differential Effects of KIM-1 in Subcutaneous and Orthotopic Renca Models of Kidney Cancer, Demitra M. Yotis DY

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Protective benefits of sodium thiosulfate-supplemented UW solution against prolonged cold ischemia-reperfusion injury during renal transplantation., Max Y. Zhang Mr.

Theses/Dissertations from 2020

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Characterizing the Role of the Microbiome in Kidney Stone Disease, Kaitlin F. Al

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Targeting CD5 to enhance immune T cell activation and function in treatment of solid tumours, Faizah Alotaibi

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HPV Mediated Antagonism of the IL-18 Proinflammatory Pathway in Head and Neck Cancer, Wyatt W. Anderson

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Investigation of the growth and survival of Staphylococcus aureus in CFTR-deficient macrophages, Bita Azad

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Staphylococcus aureus small colony variants use heme and staphyloferrin B for iron acquisition, Izabela Z. Batko

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Understanding Neonicotinoid Related Immunosuppression: A Potential for Beneficial Bacterial Intervention, John A. Chmiel

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Exploiting the immunomodulatory potentials of iNKT cells in sepsis and cancer., Joshua Choi

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Optimizing Fecal Microbiota Transplantations For Therapeutic Use Beyond Clostridioides difficile Infection, Laura J. Craven

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Cell-free DNA Release During Programmed Cell Death in Kidney Ischemia Reperfusion Injury, Alexander Dionne

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The development of bacterial magnetic resonance imaging for microbiota analyses, Sarah C. Donnelly

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Inducing DNA-Mismatch Repair Deficiency In Tumours: A Strategy To Enhance Anti-Tumour Immunity, Mikal El-Hajjar

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Investigating the Regulation of Fatty Acid Efflux Pump FarE by TetR Family Regulator FarR in Staphylococcus aureus, Katherine A. Ferguson

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Elucidating the Role of Host Tim-1 in Anti-tumour Immunity, Ingrid Hon

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Kidney Injury Molecule-1 Mediated Phagocytosis and Its Therapeutic Application in Ameliorating Renal Transplant Ischemia Reperfusion Injury, Ji Yun Lee

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B Cell Acute Lymphoblastic Leukemia is Driven by Activating Janus Kinase Mutations Cooperating with Spi1 and Spib Deletions in a Murine Model, Michelle Lim

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Development and evaluation of a heterogenous virus-like particle (VLP) formulation to achieve HIV-1 latency reversal and cure., Joshua P. Pankrac

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Designing a Novel HIV-1 Candidate Vaccine, Rahul Pawa

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Identification of the Signalosome and Signaling Pathway of the Efferocytic Receptor MERTK, Tarannum Tasnim

Theses/Dissertations from 2019

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Potential role of extracellular ATP released by bacteria in bladder infection and contractility, Behnam Abbasian

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Brain-specific and systemic inflammatory response following repetitive concussive impact in a mouse model, So Young Eo

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The Group A Streptococci Bacteriocins Facilitate a Competitive Advantage During Nasopharyngeal Infection, Lana Estafanos

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The Epigenetic And Immune Landscapes Of HPV+ Tumor Microenvironments, Steven F. Gameiro

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Utilizing FIV (Feline Immunodeficiency Virus) to develop a novel animal model to study HIV (Human Immunodeficiency Virus), Ankita Suryakant Kambli

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Designing An Optimal HIV-1 Env Immunogen For The Vesicular Stomatitis Virus Vaccine Platform And Elucidating The Role Of HIV-1 Nef In Env Trafficking, Jason Knapp

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Novel insights into the genomic integration site landscape of HIV-1 and other retrovirus genera, Hinissan P. Kohio

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The role of kidney injury molecule-1 in the metastasis of renal cell carcinoma, Jasper Lee

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Encountering Lectins In The Recipient Mucosa: Implications Of N-linked Glycosylation On HIV-1 Transmission, Adam Meadows

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Endogenous, controlled expression of anti-HIV-1 broadly neutralizing antibody, Darshit Patel

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Role of the fibronectin-binding, collagen-binding, T-antigen region during nasopharyngeal infection by Streptococcus pyogenes, Akshay Sule

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HIV-1 Group M Subtype Fitness, Disease Progression, and Entry Efficiency, Colin M. Venner

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Mucosa-Associated Invariant T Cell Roles And Local Responses In Cell-Mediated Immunity To Influenza A Virus, Christine Marie Wardell

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Metabolomic and Genomic Analysis of Lactobacillus crispatus Vaginal Isolates, Emiley Watson

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Virally Packaged RNA in Virus-Like Particle Vaccines Enhances Antigenicity and Augments Latency Reversal of HIV-1, Chanuka Wijewardhana

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Determining the Relative Transmission Fitness of HIV-1 Subtypes A, B, C, and D, Spencer Yeung

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The Role of Defective Macrophage Efferocytosis During Early Atherosclerosis in Humans, Charles Yin