Chemistry Publications
Research in the Department of Chemistry covers a broad spectrum of chemical specialties but generally falls within three research themes: Materials and Biomaterials; Computational Sciences and Environmental Science and Ecology.
Visit the Department of Chemistry website for additional information.
Submissions from 2010
Synthesis of 5-azaindoles via a cycloaddition reaction between nitriles and donor-acceptor cyclopropanes., Mahmoud M Abd Rabo Moustafa and Brian L Pagenkopf
Ytterbium triflate catalyzed synthesis of alkoxy-substituted donor-acceptor cyclobutanes and their formal [4 + 2] cycloaddition with imines: stereoselective synthesis of piperidines., Mahmoud M Abd Rabo Moustafa and Brian L Pagenkopf
Formal [4 + 2] cycloaddition of alkoxy-substituted donor-acceptor cyclobutanes and aldehydes catalyzed by Yb(OTf)3., Mahmoud M Abd Rabo Moustafa, Andrew C Stevens, Ben P Machin, and Brian L Pagenkopf
Characterizing Short-Lived Protein Folding Intermediates by Top-Down Hydrogen Exchange Mass Spectrometry, Jingxi Pan, Jun Han, Christoph H. Borchers, and Lars Konermann
Calcium-Induced Structural Transitions of the Calmodulin−Melittin System Studied by Electrospray Mass Spectrometry: Conformational Subpopulations and Metal-Unsaturated Intermediates, Jingxi Pan and Lars Konermann
Site-Directed Mutagenesis Combined with Oxidative Methionine Labeling for Probing Structural Transitions of a Membrane Protein by Mass Spectrometry, Yan Pan, Leonid Brown, and Lars Konermann
Membrane Protein Structural Insights from Chemical Labeling and Mass Spectrometry, Yan Pan and Lars Konermann
Diels-Alder chemistry of siloles and their transformation into cyclohex-2-ene-1,4-cis-diols., Andrew C Stevens and Brian L Pagenkopf
Time-Dependent Changes in Side-Chain Solvent Accessibility during Cytochrome c Folding Probed by Pulsed Oxidative Labeling and Mass Spectrometry, Bradley B. Stocks and Lars Konermann
Synthesis of MRI Contrast Agents Derived from DOTAM-Gly-L-Phe-OH Incorporating a Disulfide Bridge: Conjugation to a Cell Penetrating Peptide and Preparation of a Dimeric Agent, Mojmír Suchý, Alex X. Li, Robert Bartha, and Robert H. E. Hudson
A Paramagnetic Chemical Exchange-based MRI Probe Metabolized by Cathepsin D: Design, Synthesis and Cellular Uptake Studies, Mojmír Suchý, Robert Ta, Alex X. Li, Filip Wojciechowski, Stephen H. Pasternak, Robert Bartha, and Robert H. E. Hudson
RHAMM Promotes Interphase Microtubule Instability and Mitotic Spindle Integrity through MEK1/ERK1/2 Activity, Cornelia Tolg, Sara R. Hamilton, Lyndsey Morningstar, Jing Zhang, S. Zhang, Kenneth V. Esguerra, Patrick G. Telmer, Len G. Luyt, Rene Harrison, James B. McCarthy, and Eva A. Turley
A Single-label Phenylpyrrolocytidine Provides a Molecular Beacon-like Response Reporting HIV-1 RT RNase H Activity, Alexander S. Wahba, Abbasali Esmaeili, Masad J. Damha, and Robert H. E. Hudson
Submissions from 2009
Molecular Dynamics Simulations of Electrosprayed Water Nanodroplets: Internal Potential Gradients, Location of Excess Charge Centers, and “Hopping” Protons, Elias Ahadi and Lars Konermann
Synthesis of tetrahydroisoquinocarbazoles via C-2 alkylation of indoles with 2-alkoxycyclopropanoate esters., Barbora Bajtos and Brian L Pagenkopf
Protein Oxidative Modifications During Electrospray Ionization: Solution Phase Electrochemistry or Corona Discharge-Induced Radical Attack?, Brian L. Boys, Mark C. Kuprowski, James J. Noël, and Lars Konermann
Electrochemical and Photovoltaic Properties of Electropolymerized Poly(thienyl-silole)s, Joshua C. Byers, Paul M. DiCarmine, Mahmoud M. A. R. Moustafa, Xin Wang, Brian Pagenkopf, and Oleg A. Semenikhin
γ-Radiation Induced Interstrand Cross-Links in PNA:DNA Heteroduplexes, Tsvetan G. Gantchev, Sonia Girouard, David W. Dodd, Filip Wojciechowski, Robert H. E. Hudson, and Darel J. Hunting
Cellular Localization and Allele-selective Inhibition of Mutant Huntingtin Protein by Peptide Nucleic Acid Oligomers Containing the Fluorescent Nucleobase [bis-o-(aminoethoxy)phenyl]pyrrolocytosine, Jiaxin Hu, David W. Dodd, Robert H. E. Hudson, and David R. Corey
Sphingomyelins as Semi-permanent Capillary Coatings for Protein Separations in CE and Off-line Analysis with MALDI-MS, Kristina Jurcic and Ken K.-C. Yeung
A Simple Model for the Disintegration of Highly Charged Solvent Droplets during Electrospray Ionization, Lars Konermann
Optimized MRI Contrast for On-resonance Proton Exchange Processes of PARACEST Agents in Biological Systems, Alex X. Li, Mojmir Suchy, Craig K. Jones, Robert H. E. Hudson, Ravi S. Menon, and Robert Bartha
Phosphorylation-Induced Activation of the Response Regulator VraR from Staphylococcus aureus: Insights from Hydrogen Exchange Mass Spectrometry, Yu-Hong Liu, Antoaneta Belcheva, Lars Konermann, and Dasantila Golemi-Kotra
De Novo Interpretation of Tandem Mass Spectra, Bin Ma and Gilles Lajoie
Formation of Monomeric S100B and S100A11 Proteins at Low Ionic Strength, Nicole M. Marlatt, Brian L. Boys, Lars Konermann, and Gary S. Shaw