Chemistry Publications

 

Research in the Department of Chemistry covers a broad spectrum of chemical specialties but generally falls within three research themes: Materials and Biomaterials; Computational Sciences and Environmental Science and Ecology.

Visit the Department of Chemistry website for additional information.

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Submissions from 2010

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Characterizing Short-Lived Protein Folding Intermediates by Top-Down Hydrogen Exchange Mass Spectrometry, Jingxi Pan, Jun Han, Christoph H. Borchers, and Lars Konermann

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Calcium-Induced Structural Transitions of the Calmodulin−Melittin System Studied by Electrospray Mass Spectrometry: Conformational Subpopulations and Metal-Unsaturated Intermediates, Jingxi Pan and Lars Konermann

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Site-Directed Mutagenesis Combined with Oxidative Methionine Labeling for Probing Structural Transitions of a Membrane Protein by Mass Spectrometry, Yan Pan, Leonid Brown, and Lars Konermann

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Membrane Protein Structural Insights from Chemical Labeling and Mass Spectrometry, Yan Pan and Lars Konermann

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Diels-Alder chemistry of siloles and their transformation into cyclohex-2-ene-1,4-cis-diols., Andrew C Stevens and Brian L Pagenkopf

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Time-Dependent Changes in Side-Chain Solvent Accessibility during Cytochrome c Folding Probed by Pulsed Oxidative Labeling and Mass Spectrometry, Bradley B. Stocks and Lars Konermann

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Synthesis of MRI Contrast Agents Derived from DOTAM-Gly-L-Phe-OH Incorporating a Disulfide Bridge: Conjugation to a Cell Penetrating Peptide and Preparation of a Dimeric Agent, Mojmír Suchý, Alex X. Li, Robert Bartha, and Robert H. E. Hudson

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A Paramagnetic Chemical Exchange-based MRI Probe Metabolized by Cathepsin D: Design, Synthesis and Cellular Uptake Studies, Mojmír Suchý, Robert Ta, Alex X. Li, Filip Wojciechowski, Stephen H. Pasternak, Robert Bartha, and Robert H. E. Hudson

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RHAMM Promotes Interphase Microtubule Instability and Mitotic Spindle Integrity through MEK1/ERK1/2 Activity, Cornelia Tolg, Sara R. Hamilton, Lyndsey Morningstar, Jing Zhang, S. Zhang, Kenneth V. Esguerra, Patrick G. Telmer, Len G. Luyt, Rene Harrison, James B. McCarthy, and Eva A. Turley

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A Single-label Phenylpyrrolocytidine Provides a Molecular Beacon-like Response Reporting HIV-1 RT RNase H Activity, Alexander S. Wahba, Abbasali Esmaeili, Masad J. Damha, and Robert H. E. Hudson

Submissions from 2009

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Molecular Dynamics Simulations of Electrosprayed Water Nanodroplets: Internal Potential Gradients, Location of Excess Charge Centers, and “Hopping” Protons, Elias Ahadi and Lars Konermann

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Synthesis of tetrahydroisoquinocarbazoles via C-2 alkylation of indoles with 2-alkoxycyclopropanoate esters., Barbora Bajtos and Brian L Pagenkopf

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Protein Oxidative Modifications During Electrospray Ionization: Solution Phase Electrochemistry or Corona Discharge-Induced Radical Attack?, Brian L. Boys, Mark C. Kuprowski, James J. Noël, and Lars Konermann

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Electrochemical and Photovoltaic Properties of Electropolymerized Poly(thienyl-silole)s, Joshua C. Byers, Paul M. DiCarmine, Mahmoud M. A. R. Moustafa, Xin Wang, Brian Pagenkopf, and Oleg A. Semenikhin

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γ-Radiation Induced Interstrand Cross-Links in PNA:DNA Heteroduplexes, Tsvetan G. Gantchev, Sonia Girouard, David W. Dodd, Filip Wojciechowski, Robert H. E. Hudson, and Darel J. Hunting

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Cellular Localization and Allele-selective Inhibition of Mutant Huntingtin Protein by Peptide Nucleic Acid Oligomers Containing the Fluorescent Nucleobase [bis-o-(aminoethoxy)phenyl]pyrrolocytosine, Jiaxin Hu, David W. Dodd, Robert H. E. Hudson, and David R. Corey

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Sphingomyelins as Semi-permanent Capillary Coatings for Protein Separations in CE and Off-line Analysis with MALDI-MS, Kristina Jurcic and Ken K.-C. Yeung

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A Simple Model for the Disintegration of Highly Charged Solvent Droplets during Electrospray Ionization, Lars Konermann

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Optimized MRI Contrast for On-resonance Proton Exchange Processes of PARACEST Agents in Biological Systems, Alex X. Li, Mojmir Suchy, Craig K. Jones, Robert H. E. Hudson, Ravi S. Menon, and Robert Bartha

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Phosphorylation-Induced Activation of the Response Regulator VraR from Staphylococcus aureus: Insights from Hydrogen Exchange Mass Spectrometry, Yu-Hong Liu, Antoaneta Belcheva, Lars Konermann, and Dasantila Golemi-Kotra

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De Novo Interpretation of Tandem Mass Spectra, Bin Ma and Gilles Lajoie

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Formation of Monomeric S100B and S100A11 Proteins at Low Ionic Strength, Nicole M. Marlatt, Brian L. Boys, Lars Konermann, and Gary S. Shaw

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In-capillary Enrichment, Proteolysis and Separation Using Capillary Electrophoresis with Discontinuous Buffers: Application on Proteins with Moderately Acidic and Basic Isoelectric Points, Chandra A. Nesbitt and Ken K.-C. Yeung

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Total Synthesis of (±)-Quebrachamine via [3+2] Cycloaddition and Efficient Chloroacetamide Photocyclization, Brian Pagenkopf and Barbora Bajtos

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A General Asymmetric Aldol Reaction of Silyl Ketene Acetals Derived from Simple Esters to Aryl alpha-Ketoesters, Brian Pagenkopf and Julie Le Engers