Applied Mathematics Publications

 

Researchers in Applied Mathematics are active in the traditional areas of applied mathematics as well as in new, rapidly developing fields. Areas of applications include scientific computing, computer algebra, theoretical biology, materials physics, dynamical systems, and theoretical high-energy physics.

Visit the Applied Mathematics Research website for additional information.

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Submissions from 2023

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Pillars of Biology: 'The genetical evolution of social behaviour, I and II'., Geoff Wild

Submissions from 2017

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Evolution of delayed dispersal and subsequent emergence of helping, with implications for cooperative breeding., Geoff Wild and Judith Korb

Submissions from 2015

Sex allocation and the emergence of helping in cooperatively breeding species., Josh D Dunn, Teodora Vujicic, and Geoff Wild

Submissions from 2011

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HIV Epidemic in Far-Western Nepal: Effect of Seasonal Labor Migration to India, Naveen Vaidya and Jianhong Wu

Submissions from 2010

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Roles of Electrostatics and Conformation in Protein-Crystal Interactions, Paul V. Azzopardi, Jason O'Young, Gilles Lajoie, Mikko Karttunen, Harvey A. Goldberg, and Graeme K. Hunter

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Phosphorylation of Ser136 Is Critical for Potent Bone Sialoprotein-mediated Nucleation of Hydroxyapatite Crystals, Gurpreet S. Baht, Jason O'Young, Antonia Borovina, Hong Chen, Coralee E. Tye, Mikko Karttunen, Gilles A. Lajoie, Graeme K. Hunter, and Harvey A. Goldberg

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Identifying and Seeing beyond Multiple Sequence Alignment Errors Using Intra-Molecular Protein Covariation, Russell J. Dickson, Lindi M. Wahl, Andrew D. Fernandes, and Gregory B. Gloor

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Mutual Information Is Critically Dependent on Prior Assumptions: Would the Correct Estimate of Mutual Information Please Identify Itself?, Andrew D. Fernandes and Gregory B. Gloor

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Estimating the Evidence of Selection and the Reliability of Inference in Unigenic Evolution, Andrew D. Fernandes, Benjamin P. Kleinstiver, David R. Edgell, Lindi M. Wahl, and Gregory B. Gloor

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Microbiome Profiling by Illumina Sequencing of Combinatorial Sequence-Tagged PCR Products, Gregory B. Gloor, Ruben Hummelen, Jean M. Macklaim, Russell J. Dickson, Andrew D. Fernandes, Roderick MacPhee, and Gregor Reid

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Deep Sequencing of the Vaginal Microbiota of Women with HIV, Ruben Hummelen, Andrew D. Fernandes, Jean M. Macklaim, Russell J. Dickson, John Changalucha, Gregory B. Gloor, and Gregor Reid

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A Unified Genetic, Computational and Experimental Framework Identifies Functionally Relevant Residues of the Homing Endonuclease I-BmoI, Benjamin P. Kleinstiver, Andrew D. Fernandes, Gregory B. Gloor, and David R. Edgell

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The Carter Constant for Inclined Orbits about a Massive Kerr Black Hole: I. Circular Orbits, Peter G. Komorowski, Sree Ram Valluri, and Martin Houde

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Side-by-Side Comparison of Five Commercial Media Systems in a Mouse Model: Suboptimal In Vitro Culture Interferes with Imprint Maintenance, B. A. Market-Velker, A. D. Fernandes, and M. R. W. Mann

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D-dimensional Bose Gases and the Lambert W Function, J. Tanguay, M. Gil, D. J. Jeffrey, and S. R. Valluri

Submissions from 2009

Creating a Warmer Environment for Women in the Mathematical Sciences and in Philosophy, Samantha Brennan and Rob Corless

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A Study of Elliptical Last Stable Orbits about a Massive Kerr Black Hole, P. G. Komorowski, S. R. Valluri, and M. Houde

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Phosphorylation of Osteopontin Peptides Mediates Adsorption to and Incorporation into Calcium Oxalate Crystals, Jason O'Young, Sara Chirico, Nehal Al Tarhuni, Bernd Grohe, Mikko Karttunen, Harvey A. Goldberg, and Graeme K. Hunter

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The Lambert W Function and Quantum Statistics, Sree Ram Valluri, M. Gil, D. J. Jeffrey, and Shantanu Basu

Reconciling conflicting clinical studies of antioxidant supplementation as HIV therapy: a mathematical approach., Rolina D van Gaalen and Lindi M Wahl

Submissions from 2008

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Investigation of Uniform Expansions of Large Order Bessel Functions in Gravitational Wave Signals, F. Chrishtie, K. Rao, I. Kotsireas, and S. R. Valluri

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The SWI/SNF Protein ATRX Co-regulates Pseudoautosomal Genes that Have Translocated to Autosomes in the Mouse Genome, Michael A. Levy, Andrew D. Fernandes, Deanna C. Tremblay, Claudia Seah, and Nathalie G. Bérubé

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Gravitational Wave Signal Templates, Pattern Recognition, and Reciprocal Eulerian Gamma Functions, Marc Eric Normandin, Adam Vajda, and Sree Ram Valluri

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Chebyshev Derived Spindown Parameters for Gravitational Wave Signals from Pulsars, S. R. Valluri and M. D. Fried

Submissions from 2007

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Erythropoietin Improves Skeletal Muscle Microcirculation and Tissue Bioenergetics in a Mouse Sepsis Model, Raymond Kao, Anargyros Xenocostas, Tao Rui, Pei Yu, Weixiong Huang, James Rose, and Claudio M. Martin